22 size_t * tgt_points,
size_t count,
24 int * interpolation_complete);
44 size_t const * a_ = a, * b_ = b;
46 return (*a_ > *b_) - (*b_ > *a_);
50 size_t * list_a,
size_t count_a,
size_t * list_b,
size_t count_b) {
52 if ((count_a == 0) || (count_b == 0))
return 0;
55 size_t curr_a = SIZE_MAX, curr_b = list_b[0];
58 while ((i < count_a) && (((curr_a = list_a[i++])) < curr_b));
59 if (curr_a == curr_b)
return 1;
60 while ((j < count_b) && (((curr_b = list_b[j++])) < curr_a));
61 if (curr_a == curr_b)
return 1;
62 }
while ((i < count_a) || (j < count_b));
68 size_t * list,
size_t * list_size,
size_t * insert,
size_t insert_size) {
70 if (insert_size == 0)
return;
72 size_t new_list_size = *list_size;
73 size_t old_list_size = *list_size;
75 for (
size_t i = 0, j = 0; i < insert_size; ++i) {
76 size_t curr_insert = insert[i];
77 while ((j < old_list_size) && (list[j] < curr_insert)) ++j;
78 if ((j >= old_list_size) || (list[j] != curr_insert))
79 list[new_list_size++] = curr_insert;
82 if (new_list_size != old_list_size) {
84 *list_size = new_list_size;
90 size_t tgt_start_point,
size_t * tgt_points,
size_t * count) {
92 double const * start_coord = tgt_field_coords[tgt_start_point];
94 for (
size_t i = 0, old_count = *count; i < old_count; ++i) {
96 start_coord, tgt_field_coords[tgt_points[i]]) <= max_distance) {
97 if (new_count != i) tgt_points[new_count] = tgt_points[i];
107 size_t * from_tgt_points,
size_t * to_tgt_points,
108 size_t * count,
int * flag,
size_t * temp_cell_edges,
109 size_t ** edges_buffer,
size_t * edges_buffer_array_size) {
119 size_t old_count = *
count;
120 memset(flag, 0, old_count *
sizeof(*flag));
122 for (
size_t i = 0; i < old_count; ++i) {
123 if (from_tgt_points[i] == tgt_start_point) {
129 size_t * edges = *edges_buffer;
130 size_t num_edges = 0;
131 size_t edges_array_size = *edges_buffer_array_size;
138 num_edges = curr_num_edges;
139 memcpy(edges, curr_edges, num_edges *
sizeof(*edges));
147 for (
size_t i = 0; i < old_count; ++i) {
149 if (flag[i])
continue;
155 temp_cell_edges, curr_edges, curr_num_edges *
sizeof(*temp_cell_edges));
156 qsort(temp_cell_edges, curr_num_edges,
sizeof(*edges),
compare_size_t);
159 if (
lists_overlap(edges, num_edges, temp_cell_edges, curr_num_edges)) {
160 merge_lists(edges, &num_edges, temp_cell_edges, curr_num_edges);
165 }
while (change_flag);
167 *edges_buffer = edges;
168 *edges_buffer_array_size = edges_array_size;
170 size_t new_count = 0;
171 for (
size_t i = 0; i < old_count; ++i)
172 if (flag[i]) to_tgt_points[new_count++] = from_tgt_points[i];
179 size_t num_src_points,
size_t const *
const tgt_result_points,
180 size_t * num_tgt_per_src,
size_t * spread_tgt_result_points) {
182 size_t max_num_tgt_per_src = 0;
183 for (
size_t i = 0; i < num_src_points; ++i)
184 if (num_tgt_per_src[i] > max_num_tgt_per_src)
185 max_num_tgt_per_src = num_tgt_per_src[i];
187 int * flag =
xmalloc(max_num_tgt_per_src *
sizeof(*flag));
189 size_t new_offset = 0;
190 size_t * cell_edge_buffer = NULL;
191 size_t cell_edge_buffer_array_size = 0;
192 size_t * edge_buffer = NULL;
193 size_t edge_buffer_array_size = 0;
194 int max_num_vertice_per_tgt = 0;
195 const int * num_vertices_per_tgt =
203 for (
size_t i = 0, old_offset = 0; i < num_src_points; ++i) {
205 size_t * old_results = spread_tgt_result_points + old_offset;
206 size_t * new_results = spread_tgt_result_points + new_offset;
207 old_offset += num_tgt_per_src[i];
212 tgt_field_coords, spread_distance, tgt_result_points[i],
213 old_results, num_tgt_per_src + i);
216 for (
size_t j = 0, curr_num_tgt_per_src = num_tgt_per_src[i];
217 j < curr_num_tgt_per_src; ++j)
218 if (num_vertices_per_tgt[old_results[j]] > max_num_vertice_per_tgt)
219 max_num_vertice_per_tgt = num_vertices_per_tgt[old_results[j]];
222 cell_edge_buffer, cell_edge_buffer_array_size,
223 max_num_vertice_per_tgt);
227 interp_grid, tgt_result_points[i],
228 old_results, new_results, num_tgt_per_src + i, flag,
229 cell_edge_buffer, &edge_buffer, &edge_buffer_array_size);
231 new_offset += num_tgt_per_src[i];
235 free(cell_edge_buffer);
244 size_t const *
const src_points,
size_t const *
const num_tgt_per_src,
245 size_t total_num_tgt,
size_t const *
const tgt_result_points) {
247 double * weights =
xmalloc(total_num_tgt *
sizeof(*weights));
251 "ERROR(do_search_spmap): invalid weight_type")
254 for (
size_t i = 0, offset = 0; i < num_src_points; ++i) {
255 size_t curr_num_tgt = num_tgt_per_src[i];
256 if (curr_num_tgt == 0)
continue;
257 if (curr_num_tgt > 1) {
258 double curr_weight_data = 1.0 / (double)(curr_num_tgt);
259 for (
size_t j = 0; j < curr_num_tgt; ++j, ++offset) {
260 weights[offset] = curr_weight_data;
263 weights[offset] = 1.0;
277 for (
size_t i = 0, offset = 0; i < num_src_points; ++i) {
279 size_t curr_num_tgt = num_tgt_per_src[i];
281 if (curr_num_tgt == 0)
continue;
283 double * curr_weights = weights + offset;
285 if (curr_num_tgt > 1) {
287 size_t const *
const curr_result_points =
288 tgt_result_points + offset;
289 double const * curr_src_coord = src_field_coords[src_points[offset]];
290 offset += curr_num_tgt;
294 for (
size_t j = 0; j < curr_num_tgt; ++j) {
298 (
double*)curr_src_coord,
299 (
double*)tgt_field_coords[curr_result_points[j]]);
302 for (
size_t k = 0; k < curr_num_tgt; ++k) curr_weights[k] = 0.0;
303 curr_weights[j] = 1.0;
307 curr_weights[j] = 1.0 / distance;
313 double inv_distance_sum = 0.0;
314 for (
size_t j = 0; j < curr_num_tgt; ++j)
315 inv_distance_sum += curr_weights[j];
316 double scale = 1.0 / inv_distance_sum;
318 for (
size_t j = 0; j < curr_num_tgt; ++j) curr_weights[j] *= scale;
334 int * required_cell_areas,
double area_scale,
char const *
type,
335 double * cell_areas) {
342 for (
size_t i = 0; i < num_cells; ++i) {
343 if (required_cell_areas[i]) {
348 "ERROR(get_cell_areas): "
349 "area of %s cell (global id %"XT_INT_FMT
") is close to zero (%e)",
351 cell_areas[i] = cell_area;
361 char const * filename,
char const * varname, MPI_Comm comm,
362 int * io_ranks,
int io_rank_idx,
int num_io_ranks,
363 double ** dist_cell_areas,
size_t * dist_cell_areas_global_size) {
365#ifndef YAC_NETCDF_ENABLED
374 *dist_cell_areas = NULL;
375 *dist_cell_areas_global_size = 0;
378 "ERROR(interp_method_spmap::dist_read_cell_areas): "
379 "YAC is built without the NetCDF support");
382 if ((io_rank_idx >= 0) && (io_rank_idx < num_io_ranks)) {
394 int dimids[NC_MAX_VAR_DIMS];
396 nc_inq_var(ncid, varid, NULL, NULL, &ndims, dimids, NULL));
399 (ndims == 1) || (ndims == 2),
400 "ERROR(dist_read_cell_areas): "
401 "invalid number of dimensions for cell area variable \"%s\" from "
402 "file \"%s\" (is %d, but should be either 1 or 2)",
403 varname, filename, ndims);
407 *dist_cell_areas_global_size = 1;
408 for (
int i = 0; i < ndims; ++i) {
412 "ERROR(dist_read_cell_areas): "
413 "invalid dimension size for cell area variable \"%s\" from "
414 "file \"%s\" (is %zu, should by > 0)",
415 varname, filename, dimlen[i]);
416 *dist_cell_areas_global_size *= dimlen[i];
422 size_t start[2], count[2], offset, read_size;
425 ((
long long)*dist_cell_areas_global_size * (
long long)io_rank_idx) /
426 (
long long)num_io_ranks);
429 ((
long long)*dist_cell_areas_global_size *
430 (
long long)(io_rank_idx+1)) / (
long long)num_io_ranks) - local_start;
432 start[0] = local_start;
433 count[0] = local_count;
435 read_size = local_count;
437 start[0] = local_start / dimlen[1];
439 (local_start + local_count + dimlen[1] - 1) / dimlen[1] - start[0];
441 count[1] = dimlen[1];
442 offset = local_start - start[0] * dimlen[1];
443 read_size = count[0] * count[1];
447 *dist_cell_areas =
xmalloc(read_size *
sizeof(**dist_cell_areas));
449 nc_get_vara_double(ncid, varid, start, count, *dist_cell_areas));
454 *dist_cell_areas, *dist_cell_areas + offset,
455 local_count *
sizeof(**dist_cell_areas));
461 *dist_cell_areas =
xmalloc(1*
sizeof(**dist_cell_areas));
462 *dist_cell_areas_global_size = 0;
467 dist_cell_areas_global_size, 1,
YAC_MPI_SIZE_T, io_ranks[0], comm),
475 struct yac_spmap_cell_area_file_config file_config, MPI_Comm comm,
476 int * required_cell_areas,
char const *
type,
477 double * cell_areas) {
479 char const * routine =
"read_cell_areas";
484 int local_is_io, * io_ranks, num_io_ranks;
487 int comm_rank, comm_size;
492 while ((io_rank_idx < num_io_ranks) &&
493 (comm_rank != io_ranks[io_rank_idx]))
496 !local_is_io || (io_rank_idx < num_io_ranks),
497 "ERROR(%s): unable to determine io_rank_idx", routine);
499 double * dist_cell_areas;
500 size_t dist_cell_areas_global_size;
504 file_config.filename, file_config.varname, comm,
505 io_ranks, io_rank_idx, num_io_ranks,
506 &dist_cell_areas, &dist_cell_areas_global_size);
509 size_t num_required_cell_areas = 0;
510 for (
size_t i = 0; i < num_cells; ++i)
511 if (required_cell_areas[i]) ++num_required_cell_areas;
513 size_t * global_idx =
xmalloc(num_required_cell_areas *
sizeof(*global_idx));
514 size_t * reorder_idx =
515 xmalloc(num_required_cell_areas *
sizeof(*reorder_idx));
517 size_t * sendcounts, * recvcounts, * sdispls, * rdispls;
519 1, &sendcounts, &recvcounts, &sdispls, &rdispls, comm);
523 yac_int min_global_id = file_config.min_global_id;
524 for (
size_t i = 0, j = 0; i < num_cells; ++i) {
525 if (required_cell_areas[i]) {
527 global_cell_ids[i] >= min_global_id,
528 "ERROR(%s): %s global id %" XT_INT_FMT
" is smaller than "
529 "the minimum global id provided by the user (%" XT_INT_FMT
")",
530 routine,
type, global_cell_ids[i], min_global_id);
531 size_t idx = (size_t)(global_cell_ids[i] - min_global_id);
533 idx < dist_cell_areas_global_size,
534 "ERROR(%s): %s global id %" XT_INT_FMT
" exceeds "
535 "available size of array \"%s\" in file \"%s\" "
536 "(min_global_id %" XT_INT_FMT
")", routine,
type, global_cell_ids[i],
537 file_config.varname, file_config.filename, file_config.min_global_id);
541 ((
long long)idx * (
long long)num_io_ranks +
542 (
long long)num_io_ranks - 1) / (
long long)dist_cell_areas_global_size;
543 sendcounts[io_ranks[dist_rank_idx]]++;
550 1, sendcounts, recvcounts, sdispls, rdispls, comm);
554 global_idx, num_required_cell_areas, reorder_idx);
557 size_t request_count = recvcounts[comm_size - 1] + rdispls[comm_size - 1];
558 size_t * request_global_idx =
559 xmalloc(request_count *
sizeof(*request_global_idx));
561 global_idx, sendcounts, sdispls+1,
562 request_global_idx, recvcounts, rdispls,
567 double * requested_cell_areas =
568 xmalloc(request_count *
sizeof(*requested_cell_areas));
569 size_t global_idx_offset =
570 ((
long long)io_rank_idx * (
long long)dist_cell_areas_global_size) /
571 (
long long)num_io_ranks;
572 for (
size_t i = 0; i < request_count; ++i)
573 requested_cell_areas[i] =
574 dist_cell_areas[request_global_idx[i] - global_idx_offset];
575 free(request_global_idx);
576 free(dist_cell_areas);
579 double * temp_cell_areas =
580 xmalloc(num_required_cell_areas *
sizeof(*temp_cell_areas));
582 requested_cell_areas, recvcounts, rdispls,
583 temp_cell_areas, sendcounts, sdispls+1,
584 sizeof(*requested_cell_areas), MPI_DOUBLE, comm, routine, __LINE__);
585 free(requested_cell_areas);
590 for (
size_t i = 0; i < num_required_cell_areas; ++i)
591 cell_areas[reorder_idx[i]] = temp_cell_areas[i];
593 free(temp_cell_areas);
599 char const *
type,
struct yac_spmap_cell_area_config cell_area_config,
600 MPI_Comm comm,
size_t const * required_points,
size_t num_required_points) {
605 int * required_cell_areas =
xcalloc(num_cells,
sizeof(*required_cell_areas));
606 for (
size_t i = 0; i < num_required_points; ++i)
607 required_cell_areas[required_points[i]] = 1;
610 double * cell_areas =
xmalloc(num_cells *
sizeof(*cell_areas));
615 "ERROR(get_cell_areas): unsupported %s cell area origin",
type);
617 switch (cell_area_config.cell_area_provider) {
623 cell_area_config.sphere_radius * cell_area_config.sphere_radius;
625 basic_grid_data, required_cell_areas, area_scale,
type,
632 basic_grid_data, cell_area_config.file_config, comm,
633 required_cell_areas,
type, cell_areas);
637 free(required_cell_areas);
645 size_t num_src_points,
size_t const * src_points,
646 size_t const * num_tgt_per_src,
size_t const * tgt_points,
647 size_t total_num_weights,
double * weights) {
654 "ERROR(scale_weights): invalid scale_type")
660 double const * src_cell_areas =
666 src_points, total_num_weights):NULL;
667 double const * tgt_cell_areas =
673 tgt_points, total_num_weights):NULL;
675#define SCALE_WEIGHTS( \
676 SRC_CELL_AREA, TGT_CELL_AREA) \
678 for (size_t i = 0, offset = 0; i < num_src_points; ++i) { \
679 size_t curr_num_tgt = num_tgt_per_src[i]; \
680 for (size_t j = 0; j < curr_num_tgt; ++j, ++offset) { \
681 weights[offset] *= SRC_CELL_AREA / TGT_CELL_AREA; \
686 switch (scale_config.
type) {
696 src_cell_areas[src_points[offset]], tgt_cell_areas[tgt_points[offset]])
700 free((
void*)src_cell_areas);
701 free((
void*)tgt_cell_areas);
708 size_t num_src_points,
size_t ** src_points_,
709 size_t ** tgt_result_points_,
double ** weights_,
710 size_t * total_num_weights_) {
716 *total_num_weights_ = num_src_points;
720 size_t * src_points = *src_points_;
721 size_t * tgt_result_points = *tgt_result_points_;
723 size_t * num_tgt_per_src =
724 xmalloc(num_src_points *
sizeof(*num_tgt_per_src));
725 size_t total_num_weights;
728 if (spread_distance > 0.0) {
736 xmalloc(num_src_points *
sizeof(*search_bnd_circles));
737 for (
size_t i = 0; i < num_src_points; ++i) {
740 tgt_field_coords[tgt_result_points[i]],
sizeof(*tgt_field_coords));
742 search_bnd_circles[i].
sq_crd = DBL_MAX;
744 size_t * spread_tgt_result_points = NULL;
748 interp_grid, search_bnd_circles, num_src_points,
749 &spread_tgt_result_points, num_tgt_per_src);
750 free(search_bnd_circles);
757 interp_grid, spread_distance, num_src_points, tgt_result_points,
758 num_tgt_per_src, spread_tgt_result_points);
759 free((
void*)tgt_result_points);
762 spread_tgt_result_points,
763 total_num_weights *
sizeof(*spread_tgt_result_points));
766 size_t * new_src_points =
767 xmalloc(total_num_weights *
sizeof(*new_src_points));
768 for (
size_t i = 0, offset = 0; i < num_src_points; ++i)
769 for (
size_t j = 0, curr_src_point = src_points[i];
770 j < num_tgt_per_src[i]; ++j, ++offset)
771 new_src_points[offset] = curr_src_point;
772 free((
void*)src_points);
773 src_points = new_src_points;
777 for (
size_t i = 0; i < num_src_points; ++i) num_tgt_per_src[i] = 1;
778 total_num_weights = num_src_points;
784 interp_grid,
weight_type, num_src_points, src_points,
785 num_tgt_per_src, total_num_weights, tgt_result_points);
789 interp_grid, scale_config, num_src_points, src_points, num_tgt_per_src,
790 tgt_result_points, total_num_weights, weights);
792 free(num_tgt_per_src);
795 *tgt_result_points_ = tgt_result_points;
796 *src_points_ = src_points;
798 *total_num_weights_ = total_num_weights;
803 size_t * tgt_points,
size_t count,
805 int * interpolation_complete) {
807 if (*interpolation_complete)
return 0;
811 "ERROR(do_search_spmap): invalid number of source fields")
814 "ERROR(do_search_spmap): "
815 "invalid source field location (has to be YAC_LOC_CELL)")
818 "ERROR(do_search_spmap): "
819 "invalid target field location (has to be YAC_LOC_CELL)")
823 size_t num_src_points;
825 interp_grid, 0, &src_points, &num_src_points);
828 interp_grid, src_points, num_src_points, 0, src_coords);
831 size_t * tgt_result_points =
832 xmalloc(num_src_points *
sizeof(*tgt_result_points));
834 interp_grid, src_coords, num_src_points, 1, tgt_result_points,
841 size_t new_num_src_points = 0;
842 for (
size_t i = 0; i < num_src_points; ++i) {
843 if (tgt_result_points[i] != SIZE_MAX) {
844 if (i != new_num_src_points) {
845 src_points[new_num_src_points] = src_points[i];
846 tgt_result_points[new_num_src_points] =
847 tgt_result_points[i];
849 ++new_num_src_points;
852 num_src_points = new_num_src_points;
857 double * weight_data;
858 size_t total_num_weights;
863 &src_points, &tgt_result_points, &weight_data, &total_num_weights);
867 size_t result_count = total_num_weights;
868 int to_tgt_owner = 1;
870 interp_grid, to_tgt_owner,
871 0, &src_points, &tgt_result_points, &weight_data, &result_count);
872 total_num_weights = result_count;
876 tgt_result_points, result_count, src_points, weight_data);
879 size_t * num_src_per_tgt =
xmalloc(result_count *
sizeof(*num_src_per_tgt));
880 size_t num_unique_tgt_result_points = 0;
881 for (
size_t i = 0; i < result_count;) {
883 size_t curr_tgt = tgt_result_points[i];
884 while ((i < result_count) && (curr_tgt == tgt_result_points[i])) ++i;
885 num_src_per_tgt[num_unique_tgt_result_points] = i - prev_i;
886 tgt_result_points[num_unique_tgt_result_points] = curr_tgt;
887 ++num_unique_tgt_result_points;
889 result_count = num_unique_tgt_result_points;
891 xrealloc(num_src_per_tgt, result_count *
sizeof(*num_src_per_tgt));
893 xrealloc(tgt_result_points, result_count *
sizeof(*tgt_result_points));
897 int * reorder_flag =
xmalloc(count *
sizeof(*tgt_points));
900 for (
size_t i = 0; i < result_count; ++i) {
901 size_t curr_result_tgt = tgt_result_points[i];
902 while ((j < count) && (tgt_points[j] < curr_result_tgt))
903 reorder_flag[j++] = 1;
905 (j < count) && (curr_result_tgt == tgt_points[j]),
906 "ERROR(do_search_spmap): "
907 "required target points already in use or not available")
908 reorder_flag[j++] = 0;
910 for (; j < count; ++j) reorder_flag[j] = 1;
919 interp_grid, 0, src_points, total_num_weights);
923 interp_grid, tgt_result_points, result_count),
924 .count = result_count};
925 free(tgt_result_points);
928 if (weight_data == NULL)
930 weights, &tgts, num_src_per_tgt, srcs);
933 weights, &tgts, num_src_per_tgt, srcs, weight_data);
939 free(num_src_per_tgt);
945 struct yac_spmap_cell_area_config * cell_area_config,
char const *
type) {
950 "ERROR(check_cell_area_config): invalid %s cell_area_provider type",
type);
952 switch (cell_area_config->cell_area_provider) {
956 cell_area_config->sphere_radius > 0.0,
957 "ERROR(check_cell_area_config): invalid %s sphere_radius "
958 "(has to be >= 0.0",
type);
959 cell_area_config->file_config.filename = NULL;
960 cell_area_config->file_config.varname = NULL;
961 cell_area_config->file_config.min_global_id = XT_INT_MAX;
965#ifndef YAC_NETCDF_ENABLED
967 "ERROR(interp_method_spmap::check_cell_area_config): "
968 "YAC is built without the NetCDF support");
971 (cell_area_config->file_config.filename != NULL) &&
972 (strlen(cell_area_config->file_config.filename) > 0),
973 "ERROR(check_cell_area_config): invalid filename for %s areas",
type);
975 (cell_area_config->file_config.varname!= NULL) &&
976 (strlen(cell_area_config->file_config.varname) > 0),
977 "ERROR(check_cell_area_config): invalid varname for %s areas",
type);
978 cell_area_config->sphere_radius = 0.0;
979 cell_area_config->file_config.filename =
980 strdup(cell_area_config->file_config.filename);
981 cell_area_config->file_config.varname =
982 strdup(cell_area_config->file_config.varname);
989 double spread_distance,
double max_search_distance,
1004 "ERROR(yac_interp_method_spmap_new): invalid spread_distance "
1005 "(has to be >= 0 and <= PI/2")
1009 "ERROR(yac_interp_method_spmap_new): invalid max_search_distance "
1010 "(has to be >= 0 and <= PI")
double yac_huiliers_area(struct yac_grid_cell cell)
Area calculation on a unit sphere taken from ESMF based on L'Huilier's Theorem.
Structs and interfaces for area calculations.
enum yac_interp_ncc_weight_type weight_type
void yac_const_basic_grid_data_get_grid_cell(struct yac_const_basic_grid_data *grid_data, size_t cell_idx, struct yac_grid_cell *buffer_cell)
size_t const *const const_size_t_pointer
#define ENSURE_ARRAY_SIZE(arrayp, curr_array_size, req_size)
static double get_vector_angle(double const a[3], double const b[3])
static struct sin_cos_angle sin_cos_angle_new(double sin, double cos)
void yac_init_grid_cell(struct yac_grid_cell *cell)
void yac_free_grid_cell(struct yac_grid_cell *cell)
enum yac_location yac_interp_grid_get_tgt_field_location(struct yac_interp_grid *interp_grid)
void yac_interp_grid_relocate_src_tgt_pairs(struct yac_interp_grid *interp_grid, int to_tgt_owner, size_t src_field_idx, size_t **src_points, size_t **tgt_points, double **weights, size_t *count)
size_t yac_interp_grid_get_num_src_fields(struct yac_interp_grid *interp_grid)
void yac_interp_grid_do_bnd_circle_search_tgt(struct yac_interp_grid *interp_grid, const_bounding_circle_pointer bnd_circles, size_t count, size_t **tgt_cells, size_t *num_tgt_per_bnd_circle)
MPI_Comm yac_interp_grid_get_MPI_Comm(struct yac_interp_grid *interp_grid)
struct remote_point * yac_interp_grid_get_tgt_remote_points(struct yac_interp_grid *interp_grid, size_t *tgt_points, size_t count)
void yac_interp_grid_get_src_points(struct yac_interp_grid *interp_grid, size_t src_field_idx, size_t **src_indices, size_t *count)
enum yac_location yac_interp_grid_get_src_field_location(struct yac_interp_grid *interp_grid, size_t src_field_idx)
void yac_interp_grid_get_src_coordinates(struct yac_interp_grid *interp_grid, size_t *src_points, size_t count, size_t src_field_idx, yac_coordinate_pointer src_coordinates)
struct remote_point * yac_interp_grid_get_src_remote_points(struct yac_interp_grid *interp_grid, size_t src_field_idx, size_t *src_points, size_t count)
yac_const_coordinate_pointer yac_interp_grid_get_src_field_coords(struct yac_interp_grid *interp_grid, size_t src_field_idx)
yac_const_coordinate_pointer yac_interp_grid_get_tgt_field_coords(struct yac_interp_grid *interp_grid)
struct yac_const_basic_grid_data * yac_interp_grid_get_basic_grid_data_tgt(struct yac_interp_grid *interp_grid)
void yac_interp_grid_do_nnn_search_tgt(struct yac_interp_grid *interp_grid, yac_coordinate_pointer search_coords, size_t count, size_t n, size_t *tgt_points, double max_search_distance)
struct yac_const_basic_grid_data * yac_interp_grid_get_basic_grid_data_src(struct yac_interp_grid *interp_grid)
static int lists_overlap(size_t *list_a, size_t count_a, size_t *list_b, size_t count_b)
static void delete_spmap(struct interp_method *method)
static int compare_size_t(const void *a, const void *b)
static size_t do_search_spmap(struct interp_method *method, struct yac_interp_grid *interp_grid, size_t *tgt_points, size_t count, struct yac_interp_weights *weights, int *interpolation_complete)
static struct interp_method_vtable interp_method_spmap_vtable
static void merge_lists(size_t *list, size_t *list_size, size_t *insert, size_t insert_size)
static void remove_disconnected_points(struct yac_interp_grid *interp_grid, size_t tgt_start_point, size_t *from_tgt_points, size_t *to_tgt_points, size_t *count, int *flag, size_t *temp_cell_edges, size_t **edges_buffer, size_t *edges_buffer_array_size)
static void compute_cell_areas(struct yac_const_basic_grid_data *basic_grid_data, int *required_cell_areas, double area_scale, char const *type, double *cell_areas)
static void check_cell_area_config(struct yac_spmap_cell_area_config *cell_area_config, char const *type)
static void spread_src_data(struct yac_interp_grid *interp_grid, double spread_distance, enum yac_interp_spmap_weight_type weight_type, struct yac_spmap_scale_config scale_config, size_t num_src_points, size_t **src_points_, size_t **tgt_result_points_, double **weights_, size_t *total_num_weights_)
#define SCALE_WEIGHTS(SRC_CELL_AREA, TGT_CELL_AREA)
static void read_cell_areas(struct yac_const_basic_grid_data *basic_grid_data, struct yac_spmap_cell_area_file_config file_config, MPI_Comm comm, int *required_cell_areas, char const *type, double *cell_areas)
struct interp_method * yac_interp_method_spmap_new(double spread_distance, double max_search_distance, enum yac_interp_spmap_weight_type weight_type, struct yac_spmap_scale_config scale_config)
static size_t check_tgt_result_points(struct yac_interp_grid *interp_grid, double spread_distance, size_t num_src_points, size_t const *const tgt_result_points, size_t *num_tgt_per_src, size_t *spread_tgt_result_points)
static void check_spread_distance(yac_const_coordinate_pointer tgt_field_coords, double max_distance, size_t tgt_start_point, size_t *tgt_points, size_t *count)
static void dist_read_cell_areas(char const *filename, char const *varname, MPI_Comm comm, int *io_ranks, int io_rank_idx, int num_io_ranks, double **dist_cell_areas, size_t *dist_cell_areas_global_size)
static double * compute_weights(struct yac_interp_grid *interp_grid, enum yac_interp_spmap_weight_type weight_type, size_t num_src_points, size_t const *const src_points, size_t const *const num_tgt_per_src, size_t total_num_tgt, size_t const *const tgt_result_points)
static void scale_weights(struct yac_interp_grid *interp_grid, struct yac_spmap_scale_config scale_config, size_t num_src_points, size_t const *src_points, size_t const *num_tgt_per_src, size_t const *tgt_points, size_t total_num_weights, double *weights)
static double * get_cell_areas(struct yac_const_basic_grid_data *basic_grid_data, char const *type, struct yac_spmap_cell_area_config cell_area_config, MPI_Comm comm, size_t const *required_points, size_t num_required_points)
@ YAC_INTERP_SPMAP_NONE
weights are not scaled
@ YAC_INTERP_SPMAP_INVTGTAREA
@ YAC_INTERP_SPMAP_SRCAREA
@ YAC_INTERP_SPMAP_FRACAREA
@ YAC_INTERP_SPMAP_CELL_AREA_FILE
@ YAC_INTERP_SPMAP_CELL_AREA_YAC
yac_interp_spmap_weight_type
void yac_interp_weights_add_wsum(struct yac_interp_weights *weights, struct remote_points *tgts, size_t *num_src_per_tgt, struct remote_point *srcs, double *w)
void yac_interp_weights_add_sum(struct yac_interp_weights *weights, struct remote_points *tgts, size_t *num_src_per_tgt, struct remote_point *srcs)
void yac_get_io_ranks(MPI_Comm comm, int *local_is_io_, int **io_ranks_, int *num_io_ranks_)
void yac_nc_inq_varid(int ncid, char const *name, int *varidp)
void yac_nc_open(const char *path, int omode, int *ncidp)
#define YAC_HANDLE_ERROR(exp)
#define xrealloc(ptr, size)
#define xcalloc(nmemb, size)
struct sin_cos_angle inc_angle
angle between the middle point and the boundary of the spherical cap
struct yac_spmap_scale_config scale_config
enum yac_interp_spmap_weight_type weight_type
double max_search_distance
struct interp_method_vtable * vtable
size_t(* do_search)(struct interp_method *method, struct yac_interp_grid *grid, size_t *tgt_points, size_t count, struct yac_interp_weights *weights, int *interpolation_complete)
information (global id and location) about a point that
structure containing the information (global id and location)
struct remote_point * data
const const_int_pointer num_vertices_per_cell
const_size_t_pointer cell_to_edge
const const_yac_int_pointer ids[3]
const_size_t_pointer cell_to_edge_offsets
struct yac_spmap_scale_config::yac_spmap_cell_area_config::yac_spmap_cell_area_file_config file_config
struct yac_spmap_scale_config::yac_spmap_cell_area_config src
struct yac_spmap_scale_config::yac_spmap_cell_area_config tgt
enum yac_interp_spmap_scale_type type
void yac_quicksort_index_size_t_size_t_double(size_t *a, size_t n, size_t *b, double *c)
void yac_quicksort_index_int_size_t(int *a, size_t n, size_t *idx)
void yac_quicksort_index_size_t_size_t(size_t *a, size_t n, size_t *idx)
#define YAC_ASSERT_F(exp, format,...)
#define YAC_ASSERT(exp, msg)
void yac_generate_alltoallv_args(int count, size_t const *sendcounts, size_t *recvcounts, size_t *sdispls, size_t *rdispls, MPI_Comm comm)
void yac_free_comm_buffers(size_t *sendcounts, size_t *recvcounts, size_t *sdispls, size_t *rdispls)
void yac_get_comm_buffers(int count, size_t **sendcounts, size_t **recvcounts, size_t **sdispls, size_t **rdispls, MPI_Comm comm)
void yac_alltoallv_p2p(void const *send_buffer, size_t const *sendcounts, size_t const *sdispls, void *recv_buffer, size_t const *recvcounts, size_t const *rdispls, size_t dt_size, MPI_Datatype dt, MPI_Comm comm, char const *caller, int line)
#define yac_mpi_call(call, comm)
double const (* yac_const_coordinate_pointer)[3]
double(* yac_coordinate_pointer)[3]